STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbn-wht-8CBN-WHT-8 protein. (562 aa)    
Predicted Functional Partners:
Cbn-abch-1
CBN-ABCH-1 protein.
   
0.893
Cbn-mrp-5
CBN-MRP-5 protein.
  
 0.788
CAEBREN_30823
Cation_ATPase_N domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
 0.643
CAEBREN_08131
Uncharacterized protein.
   
   0.629
CAEBREN_11373
Uncharacterized protein.
    
 0.611
CAEBREN_18218
Protein kinase domain-containing protein.
   
    0.607
CAEBREN_04584
Uncharacterized protein.
   
    0.600
Cbn-acs-10
CBN-ACS-10 protein.
  
  
 0.596
CAEBREN_12560
RNase H domain-containing protein.
  
    0.590
Cbn-atp-2
CBN-ATP-2 protein.
   
 
 0.589
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.