STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAEBREN_32774Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (329 aa)    
Predicted Functional Partners:
Cbn-unc-7
Innexin; Structural component of the gap junctions. Belongs to the pannexin family.
   
  
 0.587
Cbn-moc-1
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
 
 0.582
Cbn-moc-2
CBN-MOC-2 protein.
    
 
 0.582
CAEBREN_12629
Uncharacterized protein.
    
 
 0.582
CAEBREN_17073
MoCF_biosynth domain-containing protein.
    
 
 0.582
Cbn-dyf-7
CBN-DYF-7 protein.
      
 0.579
Cbn-ben-1
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
      
 0.569
CAEBREN_29511
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
      
 0.569
Cbn-unc-9
Innexin; Structural component of the gap junctions. Belongs to the pannexin family.
      
 0.568
CAEBREN_13813
Uncharacterized protein.
      
 0.563
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.