STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbn-pus-1CBN-PUS-1 protein. (431 aa)    
Predicted Functional Partners:
CAEBREN_14928
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.964
CAEBREN_15909
PUA domain-containing protein.
  
 0.942
CAEBREN_21539
Uncharacterized protein.
  
  
 0.894
CAEBREN_07060
Uncharacterized protein.
  
 0.877
CAEBREN_09720
Uncharacterized protein.
  
 0.877
CAEBREN_05960
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
  
 
 0.853
CAEBREN_19524
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
  
 
 0.853
CAEBREN_24695
RPOLD domain-containing protein.
  
  
 0.844
CAEBREN_14407
RPOLD domain-containing protein.
  
  
 0.844
CAEBREN_31421
RPOLD domain-containing protein.
  
  
 0.844
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.