Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAEBREN_09981 | CAEBREN_11675 | G0MCV1 | G0N5N2 | Uncharacterized protein. | KH domain-containing protein. | 0.762 |
CAEBREN_09981 | CAEBREN_22901 | G0MCV1 | G0MIS4 | Uncharacterized protein. | KH domain-containing protein. | 0.563 |
CAEBREN_09981 | Cbn-bcc-1 | G0MCV1 | G0NRN4 | Uncharacterized protein. | CBN-BCC-1 protein. | 0.580 |
CAEBREN_11675 | CAEBREN_09981 | G0N5N2 | G0MCV1 | KH domain-containing protein. | Uncharacterized protein. | 0.762 |
CAEBREN_11675 | CAEBREN_22676 | G0N5N2 | G0MIE9 | KH domain-containing protein. | Uncharacterized protein. | 0.762 |
CAEBREN_11675 | CAEBREN_22901 | G0N5N2 | G0MIS4 | KH domain-containing protein. | KH domain-containing protein. | 0.753 |
CAEBREN_11675 | CAEBREN_23426 | G0N5N2 | G0NUT7 | KH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.689 |
CAEBREN_11675 | Cbn-bcc-1 | G0N5N2 | G0NRN4 | KH domain-containing protein. | CBN-BCC-1 protein. | 0.768 |
CAEBREN_11675 | Cbn-mdt-15 | G0N5N2 | G0P3Z1 | KH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.768 |
CAEBREN_11675 | Cbn-mdt-17 | G0N5N2 | G0N0X0 | KH domain-containing protein. | CBN-MDT-17 protein. | 0.760 |
CAEBREN_11675 | Cbn-mec-8 | G0N5N2 | G0MEZ3 | KH domain-containing protein. | CBN-MEC-8 protein. | 0.693 |
CAEBREN_11675 | Cbn-rgr-1 | G0N5N2 | G0MK19 | KH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.760 |
CAEBREN_11675 | MED4 | G0N5N2 | G0PF89 | KH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.765 |
CAEBREN_22676 | CAEBREN_11675 | G0MIE9 | G0N5N2 | Uncharacterized protein. | KH domain-containing protein. | 0.762 |
CAEBREN_22676 | CAEBREN_22901 | G0MIE9 | G0MIS4 | Uncharacterized protein. | KH domain-containing protein. | 0.563 |
CAEBREN_22676 | Cbn-bcc-1 | G0MIE9 | G0NRN4 | Uncharacterized protein. | CBN-BCC-1 protein. | 0.580 |
CAEBREN_22901 | CAEBREN_09981 | G0MIS4 | G0MCV1 | KH domain-containing protein. | Uncharacterized protein. | 0.563 |
CAEBREN_22901 | CAEBREN_11675 | G0MIS4 | G0N5N2 | KH domain-containing protein. | KH domain-containing protein. | 0.753 |
CAEBREN_22901 | CAEBREN_22676 | G0MIS4 | G0MIE9 | KH domain-containing protein. | Uncharacterized protein. | 0.563 |
CAEBREN_22901 | Cbn-bcc-1 | G0MIS4 | G0NRN4 | KH domain-containing protein. | CBN-BCC-1 protein. | 0.580 |
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