STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbn-dop-4CBN-DOP-4 protein. (419 aa)    
Predicted Functional Partners:
Cbn-dop-3
CBN-DOP-3 protein; Belongs to the G-protein coupled receptor 1 family.
   
0.963
Cbn-dop-2
CBN-DOP-2 protein; Belongs to the G-protein coupled receptor 1 family.
   
0.963
Cbn-gsa-1
CBN-GSA-1 protein.
    
 0.944
Cbn-egl-30
CBN-EGL-30 protein.
    
 0.922
CAEBREN_14713
WD_REPEATS_REGION domain-containing protein.
    
 0.864
CAEBREN_03128
WD_REPEATS_REGION domain-containing protein.
    
 0.864
CAEBREN_20153
WD_REPEATS_REGION domain-containing protein.
    
 0.864
CAEBREN_16703
Uncharacterized protein.
    
 0.860
Cbn-unc-89
CBN-UNC-89 protein.
    
 0.834
CAEBREN_11889
Uncharacterized protein.
    
 0.834
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.