STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAEBREN_06418Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (55 aa)    
Predicted Functional Partners:
CAEBREN_16398
Uncharacterized protein.
   
 0.754
Cbn-nuo-1
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
  
 0.721
Cbn-gas-1
CBN-GAS-1 protein; Belongs to the complex I 49 kDa subunit family.
   
  
 0.666
Cbn-nduf-2.2
CBN-NDUF-2.2 protein; Belongs to the complex I 49 kDa subunit family.
   
  
 0.666
CAEBREN_21857
Epimerase domain-containing protein.
   
 
 0.659
CAEBREN_11371
Uncharacterized protein.
   
  
 0.628
CAEBREN_10431
Plug_translocon domain-containing protein.
    
 
 0.621
CAEBREN_04708
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
   
 
 0.617
CAEBREN_19289
Cytochrome c domain-containing protein.
   
 
 0.566
CAEBREN_02343
Uncharacterized protein.
   
 
 0.566
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.