STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAEBREN_28722Uncharacterized protein. (1845 aa)    
Predicted Functional Partners:
Cbn-fars-2
CBN-FARS-2 protein; Belongs to the protein kinase superfamily.
    
 0.972
CAEBREN_14483
Uncharacterized protein.
   
 
 0.941
Cbn-atl-1
CBN-ATL-1 protein; Belongs to the PI3/PI4-kinase family.
   
 0.934
Cbn-tim-1
CBN-TIM-1 protein.
    
 
 0.933
Cbn-srr-7
CBN-SRR-7 protein.
   
   0.918
Cbn-arx-3
Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
    0.908
CAEBREN_25042
DNA helicase; Belongs to the MCM family.
   
 0.882
Cbn-mcm-4
DNA helicase; Belongs to the MCM family.
   
 0.882
Cbn-mcm-2
DNA helicase; Belongs to the MCM family.
   
 0.875
CAEBREN_02813
DNA helicase; Belongs to the MCM family.
   
 0.875
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.