STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAEBREN_01867Methyltransf_11 domain-containing protein. (351 aa)    
Predicted Functional Partners:
CAEBREN_04708
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
    
 0.985
CAEBREN_11870
Uncharacterized protein.
    
 0.983
CAEBREN_16452
Uncharacterized protein.
   
 0.871
CAEBREN_09463
Uncharacterized protein.
   
 0.871
CAEBREN_25478
Uncharacterized protein.
   
 
 0.861
CAEBREN_05521
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 0.859
CAEBREN_06610
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
   
 
 0.843
Cbn-rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.837
CAEBREN_17331
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.836
CAEBREN_11371
Uncharacterized protein.
  
 
 0.832
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.