STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPZ44641.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (89 aa)    
Predicted Functional Partners:
EPZ44642.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.601
EPZ44643.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sigma-70 factor family. ECF subfamily.
       0.601
EPZ44640.1
Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the AlaDH/PNT family.
       0.522
EPZ44639.1
Aromatic ring hydroxylating enzyme; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.446
pyrD
Hypothetical protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.422
Your Current Organism:
Alicyclobacillus acidoterrestris
NCBI taxonomy Id: 1356854
Other names: A. acidoterrestris ATCC 49025, Alicyclobacillus acidoterrestris ATCC 49025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.