STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHG40751.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)    
Predicted Functional Partners:
AHG42641.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
AHG42643.1
Chromosome segregation ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
AHG42989.1
HDOD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
AHG41374.1
Helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.515
AHG43447.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
AHG42642.1
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
AHG40620.1
Nickel ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
AHG39886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
Your Current Organism:
Pseudomonas syringae CC1557
NCBI taxonomy Id: 1357279
Other names: P. syringae CC1557
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