STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_02460Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)    
Predicted Functional Partners:
BEH_02465
K(+)/H(+) antiporter subunit KhtT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.986
BEH_02470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
BEH_18475
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.529
msrB
Methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
   
 0.526
xylA
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family.
   
 
  0.496
BEH_05770
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.447
BEH_08285
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.447
BEH_10195
Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.447
BEH_11480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.422
BEH_08300
SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.416
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.