STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_03070Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)    
Predicted Functional Partners:
BEH_03065
2-hydroxy-6-oxononatrienedioate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.893
BEH_12270
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
BEH_13015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.618
BEH_09620
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
BEH_09475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.524
BEH_14930
Bacitracin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
birA
biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.479
BEH_12615
Lincosamide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
  
  
  0.448
BEH_06375
NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.430
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.