STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_03300Zinc transporter ZitB; Involved in zinc efflux across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)    
Predicted Functional Partners:
BEH_10930
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.685
BEH_21505
Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.523
BEH_21830
Manganese ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.480
BEH_03295
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.474
BEH_10290
Copper transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.450
BEH_21500
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.437
BEH_04840
Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.430
BEH_20360
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.430
BEH_02695
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.429
BEH_15630
Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.415
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
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