STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_03470Tryptophan transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)    
Predicted Functional Partners:
BEH_06110
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.665
serC
MFS transporter; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
       0.589
BEH_05100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.580
BEH_07110
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.580
BEH_02815
Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
BEH_03235
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
BEH_00490
Anthranilate synthase component II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.526
BEH_19630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
BEH_03430
SigE-dependent sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.490
mtrB
Transcription attenuation protein MtrB; Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan. Belongs to the MtrB family.
  
   
 0.457
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
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