STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_05985Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
BEH_05990
Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.847
BEH_05980
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.744
BEH_19890
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.621
BEH_06890
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.537
BEH_14675
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.515
BEH_10345
Spore coat protein CotJB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.489
BEH_08365
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.485
BEH_05995
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.469
BEH_10350
CotJA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.459
BEH_16275
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.414
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.