STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_07305Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)    
Predicted Functional Partners:
BEH_07300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.603
BEH_07295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.591
rsfS
Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
     0.514
BEH_07290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
BEH_03080
Protein prkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.454
cmk
Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
BEH_03085
Stress response protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.
   
    0.418
clpX
ATP-dependent protease; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
     0.416
tadA
Adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
     0.406
BEH_03245
Stage V sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.406
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.