STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_09435Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
BEH_23700
Spore gernimation protein GerQ; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA.
 
  
 0.956
BEH_17755
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.813
BEH_01400
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
BEH_12375
Stage II sporulation protein P; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.750
BEH_04695
Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.742
sspI
Small acid-soluble spore protein SspI; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspI family.
  
     0.737
BEH_18690
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
BEH_22310
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
BEH_18955
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.698
BEH_23680
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.