STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_15460GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)    
Predicted Functional Partners:
BEH_15455
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.854
araA
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
   
 0.817
araD
Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.806
BEH_08055
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.797
BEH_16450
PTS beta-glucoside transporter subunit IIABC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.780
BEH_16975
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.656
BEH_10715
Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.640
BEH_17335
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.628
xylB
Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.570
BEH_21175
Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.529
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.