STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_19005CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)    
Predicted Functional Partners:
BEH_19015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
BEH_19010
ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.791
BEH_03610
Spore gernimation protein GerPD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
BEH_05490
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
BEH_03620
Spore gernimation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.665
BEH_00880
Bacteriocin maturation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.646
BEH_00885
Bacteriocin biosynthesis protein SagD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.646
BEH_03615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
BEH_06260
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
BEH_19000
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.629
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.