STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_19600Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)    
Predicted Functional Partners:
BEH_19585
Stage III sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.809
BEH_19590
Stage III sporulation protein SpoAB; Necessary for complete engulfment of forespore; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.782
BEH_19565
Stage III sporulation protein AG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.775
BEH_19575
Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.771
BEH_19580
Stage III sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.731
BEH_19595
Stage III sporulation protein AA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.703
BEH_19930
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.586
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.570
BEH_16820
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.557
BEH_19570
Stage III sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.557
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.