STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEH_23950Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)    
Predicted Functional Partners:
BEH_23955
LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
BEH_04490
Two-component response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.936
BEH_22605
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.750
BEH_23960
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.733
BEH_02145
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.711
BEH_00985
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.658
BEH_00980
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.562
BEH_12045
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.497
BEH_08780
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.485
BEH_05765
Protein PsiE-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PsiE family.
  
     0.484
Your Current Organism:
Bacillus endophyticus
NCBI taxonomy Id: 135735
Other names: Bacillus endophyticus Reva et al. 2002, CIP 106778, DSM 13796, JCM 12211, UCM B-5715, strain 2DT
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.