STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONF45306.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)    
Predicted Functional Partners:
ONF45496.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
ONF45497.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.917
ONF45362.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.909
ONF43079.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.893
ONF43385.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.865
ONF45305.1
Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.741
ONF45008.1
Outer membrane lipoprotein-sorting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.523
ONF45478.1
Outer membrane lipoprotein-sorting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.523
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.523
ONF43753.1
Outer membrane lipoprotein-sorting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.523
Your Current Organism:
Marinobacter lutaoensis
NCBI taxonomy Id: 135739
Other names: Aeromarinobacter lutaoensis, BCRC 17087, CCRC 17087, CCRC:17087, JCM 11179, M. lutaoensis, Marinobacter lutaoensis Shieh et al. 2003, Marinothermus lutaoensis, strain T5054
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