STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONF42294.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)    
Predicted Functional Partners:
ONF43772.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.887
ONF45468.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.868
ONF42457.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.841
ONF42848.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.823
ONF43585.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.803
ONF42283.1
Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
ONF42284.1
Type VI secretion system ImpA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
ONF43742.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.743
ONF42282.1
ClpV1 family T6SS ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.
       0.681
ONF44413.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.675
Your Current Organism:
Marinobacter lutaoensis
NCBI taxonomy Id: 135739
Other names: Aeromarinobacter lutaoensis, BCRC 17087, CCRC 17087, CCRC:17087, JCM 11179, M. lutaoensis, Marinobacter lutaoensis Shieh et al. 2003, Marinothermus lutaoensis, strain T5054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.