STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETD23459.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
ETD24987.1
Cytochrome c oxidase, cbb3-type, subunit II.
  
 0.871
ETD24988.1
Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 0.848
truD
Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
       0.714
ETD23458.1
Hypothetical protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.714
ETD22929.1
Hypothetical protein.
    
 0.654
ETD23359.1
Cytochrome c-type biogenesis protein CcsB.
     
 0.524
ETD23460.1
Penicillin-binding protein 2.
       0.431
Your Current Organism:
Helicobacter macacae
NCBI taxonomy Id: 1357400
Other names: H. macacae MIT 99-5501, Helicobacter macacae MIT 99-5501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.