STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_08909SCP2 domain-containing protein. (173 aa)    
Predicted Functional Partners:
BSLG_03926
Malate synthase; Belongs to the malate synthase family.
   
 
 0.830
BSLG_01565
Isocitrate lyase.
  
 
 0.825
BSLG_04719
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.820
BSLG_03981
Uncharacterized protein.
   
 0.815
BSLG_01737
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.811
BSLG_03477
Uncharacterized protein.
  
 
 0.796
BSLG_07211
Acyl-CoA thioesterase II.
   
 
 0.779
BSLG_08288
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.777
BSLG_07603
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.777
BSLG_05325
Uncharacterized protein.
   
 0.775
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
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