BSLG_08965 protein (Batrachochytrium salamandrivorans)

Nodes:

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second shell of interactors

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a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

BSLG_08965

Abhydrolase_3 domain-containing protein. (232 aa)

Predicted Functional Partners:

BSLG_06379

0.844

BSLG_06907

0.841

BSLG_06419

0.823

BSLG_04583

0.810

BSLG_06032

0.776

BSLG_01666

0.771

BSLG_09054

0.764

BSLG_00798

0.764

BSLG_01279

0.739

BSLG_00891

0.739

Your Current Organism:

Batrachochytrium salamandrivorans

NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BSLG_00798	BSLG_08965	A0A1S8W7C4	A0A1S8VDU3	Pyridoxamine 5'-phosphate oxidase.	Abhydrolase_3 domain-containing protein.	0.764
BSLG_00798	BSLG_09054	A0A1S8W7C4	A0A1S8VCW1	Pyridoxamine 5'-phosphate oxidase.	YjeF family domain-containing protein.	0.978
BSLG_00891	BSLG_01279	A0A1S8W708	A0A1S8W5K1	Uncharacterized protein.	HRDC domain-containing protein.	0.991
BSLG_00891	BSLG_01666	A0A1S8W708	A0A1S8W472	Uncharacterized protein.	DRIM domain-containing protein.	0.998
BSLG_00891	BSLG_08965	A0A1S8W708	A0A1S8VDU3	Uncharacterized protein.	Abhydrolase_3 domain-containing protein.	0.739
BSLG_01279	BSLG_00891	A0A1S8W5K1	A0A1S8W708	HRDC domain-containing protein.	Uncharacterized protein.	0.991
BSLG_01279	BSLG_01666	A0A1S8W5K1	A0A1S8W472	HRDC domain-containing protein.	DRIM domain-containing protein.	0.987
BSLG_01279	BSLG_08965	A0A1S8W5K1	A0A1S8VDU3	HRDC domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.739
BSLG_01666	BSLG_00891	A0A1S8W472	A0A1S8W708	DRIM domain-containing protein.	Uncharacterized protein.	0.998
BSLG_01666	BSLG_01279	A0A1S8W472	A0A1S8W5K1	DRIM domain-containing protein.	HRDC domain-containing protein.	0.987
BSLG_01666	BSLG_08965	A0A1S8W472	A0A1S8VDU3	DRIM domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.771
BSLG_04583	BSLG_06379	A0A1S8VTN2	A0A1S8VMH1	Uncharacterized protein.	Uncharacterized protein.	0.972
BSLG_04583	BSLG_06419	A0A1S8VTN2	A0A1S8VMC8	Uncharacterized protein.	Uncharacterized protein.	0.689
BSLG_04583	BSLG_06907	A0A1S8VTN2	A0A1S8VKC3	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.907
BSLG_04583	BSLG_08965	A0A1S8VTN2	A0A1S8VDU3	Uncharacterized protein.	Abhydrolase_3 domain-containing protein.	0.810
BSLG_06032	BSLG_06379	A0A1S8VNR6	A0A1S8VMH1	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Uncharacterized protein.	0.406
BSLG_06032	BSLG_06419	A0A1S8VNR6	A0A1S8VMC8	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Uncharacterized protein.	0.964
BSLG_06032	BSLG_08965	A0A1S8VNR6	A0A1S8VDU3	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Abhydrolase_3 domain-containing protein.	0.776
BSLG_06379	BSLG_04583	A0A1S8VMH1	A0A1S8VTN2	Uncharacterized protein.	Uncharacterized protein.	0.972
BSLG_06379	BSLG_06032	A0A1S8VMH1	A0A1S8VNR6	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.406

page 1 of 3

Network Stats

number of nodes:

11

number of edges:

26

average node degree:

4.73

avg. local clustering coefficient:

0.881

expected number of edges:

11

PPI enrichment p-value:

0.000163

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006351

Transcription, DNA-templated

5 of 40

1.62

1.67

0.00012

GO:0006352

DNA-templated transcription, initiation

3 of 25

1.6

0.86

0.0177

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016987

Sigma factor activity

3 of 24

1.62

0.7

0.0400

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000428

DNA-directed RNA polymerase complex

2 of 7

1.98

0.79

0.0321

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:6578

Mixed, incl. RNA polymerase sigma factor 70, ECF, conserved site

5 of 5

2.53

4.04

1.63e-08

CL:6538

Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2, and Formate transport

6 of 29

1.84

2.96

8.31e-08

CL:286

RNA polymerase, and Transcription antitermination

2 of 5

2.13

0.88

0.0226

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03020

RNA polymerase

2 of 4

2.22

0.99

0.0145

map02020

Two-component system

5 of 250

0.83

0.49

0.0298

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0000428

DNA-directed RNA polymerase complex

5 of 64

1.42

1.41

0.00021

GOCC:0032991

Protein-containing complex

6 of 439

0.66

0.4

0.0336

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0731

Sigma factor

3 of 21

1.68

1.15

0.0041

KW-0240

DNA-directed RNA polymerase

2 of 5

2.13

1.02

0.0120

KW-0804

Transcription

5 of 123

1.13

0.85

0.0039

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF04542

Sigma-70 region 2

3 of 18

1.75

0.92

0.0149

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR013249

RNA polymerase sigma factor 70, region 4 type 2

3 of 11

1.96

1.03

0.0108

IPR039425

RNA polymerase sigma-70 like

3 of 12

1.92

1.02

0.0108

IPR014284

RNA polymerase sigma-70 like domain

3 of 21

1.68

0.85

0.0197

IPR013325

RNA polymerase sigma factor, region 2

3 of 21

1.68

0.85

0.0197

IPR013324

RNA polymerase sigma factor, region 3/4-like

3 of 22

1.66

0.85

0.0197

(more ...)

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