STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_07890Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (181 aa)    
Predicted Functional Partners:
BSLG_03323
SUI1 domain-containing protein.
   
 
 0.988
BSLG_01963
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.964
BSLG_04743
Translation initiation factor SUI1.
   
 
 0.949
BSLG_01101
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
    0.906
BSLG_05202
GTP-binding protein YchF.
 
 
    0.877
BSLG_00374
40S ribosomal protein S28.
    
   0.785
BSLG_08587
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.744
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.736
BSLG_01838
40S ribosomal protein; Belongs to the universal ribosomal protein uS3 family.
    
   0.735
BSLG_07818
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.734
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
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