BSLG_06273 protein (Batrachochytrium salamandrivorans)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

BSLG_06273

HTH cro/C1-type domain-containing protein. (149 aa)

Predicted Functional Partners:

BSLG_01963

0.990

BSLG_01838

0.971

BSLG_03536

0.963

BSLG_03345

0.961

BSLG_02621

0.961

BSLG_00211

0.957

BSLG_02312

0.954

BSLG_04206

0.953

BSLG_01522

0.952

BSLG_02929

0.947

Your Current Organism:

Batrachochytrium salamandrivorans

NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BSLG_00211	BSLG_01522	A0A1S8W9L9	A0A1S8W4N0	S10_plectin domain-containing protein.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.999
BSLG_00211	BSLG_01838	A0A1S8W9L9	A0A1S8W4R4	S10_plectin domain-containing protein.	40S ribosomal protein; Belongs to the universal ribosomal protein uS3 family.	0.999
BSLG_00211	BSLG_01963	A0A1S8W9L9	A0A1S8W2Y4	S10_plectin domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
BSLG_00211	BSLG_02312	A0A1S8W9L9	A0A1S8W200	S10_plectin domain-containing protein.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.999
BSLG_00211	BSLG_02621	A0A1S8W9L9	A0A1S8W0E4	S10_plectin domain-containing protein.	Guanine nucleotide-binding protein subunit beta-2-like 1.	0.999
BSLG_00211	BSLG_02929	A0A1S8W9L9	A0A1S8VZP0	S10_plectin domain-containing protein.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
BSLG_00211	BSLG_03345	A0A1S8W9L9	A0A1S8VXS2	S10_plectin domain-containing protein.	40S ribosomal protein S9-A.	0.999
BSLG_00211	BSLG_03536	A0A1S8W9L9	A0A1S8VXL9	S10_plectin domain-containing protein.	40S ribosomal protein S20.	0.999
BSLG_00211	BSLG_04206	A0A1S8W9L9	A0A1S8VUW0	S10_plectin domain-containing protein.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
BSLG_00211	BSLG_06273	A0A1S8W9L9	A0A1S8VMD1	S10_plectin domain-containing protein.	HTH cro/C1-type domain-containing protein.	0.957
BSLG_01522	BSLG_00211	A0A1S8W4N0	A0A1S8W9L9	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	S10_plectin domain-containing protein.	0.999
BSLG_01522	BSLG_01838	A0A1S8W4N0	A0A1S8W4R4	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein; Belongs to the universal ribosomal protein uS3 family.	0.999
BSLG_01522	BSLG_01963	A0A1S8W4N0	A0A1S8W2Y4	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
BSLG_01522	BSLG_02312	A0A1S8W4N0	A0A1S8W200	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.999
BSLG_01522	BSLG_02621	A0A1S8W4N0	A0A1S8W0E4	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	Guanine nucleotide-binding protein subunit beta-2-like 1.	0.999
BSLG_01522	BSLG_02929	A0A1S8W4N0	A0A1S8VZP0	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
BSLG_01522	BSLG_03345	A0A1S8W4N0	A0A1S8VXS2	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S9-A.	0.999
BSLG_01522	BSLG_03536	A0A1S8W4N0	A0A1S8VXL9	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S20.	0.999
BSLG_01522	BSLG_04206	A0A1S8W4N0	A0A1S8VUW0	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
BSLG_01522	BSLG_06273	A0A1S8W4N0	A0A1S8VMD1	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	HTH cro/C1-type domain-containing protein.	0.952

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Network Stats

number of nodes:

11

number of edges:

47

average node degree:

8.55

avg. local clustering coefficient:

0.828

expected number of edges:

11

PPI enrichment p-value:

2.89e-15

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0022900

Electron transport chain

11 of 79

1.72

4.39

3.26e-16

GO:0006119

Oxidative phosphorylation

7 of 30

1.94

4.07

9.72e-11

GO:0019646

Aerobic electron transport chain

4 of 12

2.1

2.69

3.11e-06

GO:0022904

Respiratory electron transport chain

5 of 32

1.77

2.47

1.30e-06

GO:0042773

ATP synthesis coupled electron transport

2 of 12

1.8

0.77

0.0322

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0004129

Cytochrome-c oxidase activity

10 of 23

2.21

7.32

1.65e-18

GO:0016682

Oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor

4 of 9

2.22

3.04

8.05e-07

GO:0005507

Copper ion binding

4 of 11

2.14

2.87

1.36e-06

GO:0009486

Cytochrome bo3 ubiquinol oxidase activity

3 of 3

2.58

2.68

9.92e-06

GO:0020037

Heme binding

3 of 28

1.61

1.24

0.0020

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0070469

Respirasome

6 of 16

2.15

4.24

5.93e-10

GO:0005886

Plasma membrane

11 of 792

0.72

0.71

8.24e-07

GO:0016021

Integral component of membrane

11 of 885

0.67

0.64

1.39e-06

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:3024

Cytochrome-c oxidase activity, and Cytochrome C oxidase subunit IV, prokaryotes

11 of 19

2.34

9.08

2.90e-22

CL:3026

Mixed, incl. Copper, and Heme O metabolic process

4 of 7

2.33

3.09

9.14e-07

CL:3045

Oxidoreductase activity, acting on diphenols and related substances as donors, and Heme O metabolic process

2 of 5

2.18

1.02

0.0124

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00190

Oxidative phosphorylation

11 of 88

1.67

4.22

1.02e-16

map01100

Metabolic pathways

11 of 1467

0.45

0.38

0.00072

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0070469

Respirasome

8 of 40

1.88

4.18

7.86e-12

GOCC:0009319

Cytochrome o ubiquinol oxidase complex

2 of 5

2.18

1.02

0.0126

GOCC:0016020

Membrane

11 of 677

0.79

0.81

3.39e-07

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0679

Respiratory chain

6 of 11

2.31

4.71

1.75e-10

KW-0560

Oxidoreductase

8 of 154

1.29

1.83

4.93e-08

KW-0186

Copper

2 of 3

2.4

1.48

0.0018

KW-1133

Transmembrane helix

11 of 985

0.62

0.57

7.89e-06

KW-0812

Transmembrane

11 of 985

0.62

0.57

7.89e-06

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00510

Cytochrome c oxidase subunit III

4 of 4

2.58

3.16

1.11e-06

PF00116

Cytochrome C oxidase subunit II, periplasmic domain

4 of 6

2.4

3.0

1.66e-06

PF02790

Cytochrome C oxidase subunit II, transmembrane domain

2 of 2

2.58

1.16

0.0076

PF00115

Cytochrome C and Quinol oxidase polypeptide I

2 of 7

2.03

0.78

0.0341

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR024791

Cytochrome c oxidase subunit III

4 of 4

2.58

2.96

2.81e-06

IPR011759

Cytochrome C oxidase subunit II, transmembrane domain

4 of 4

2.58

2.96

2.81e-06

IPR035973

Cytochrome c oxidase subunit III-like superfamily

4 of 5

2.48

2.92

2.81e-06

IPR000298

Cytochrome c oxidase subunit III-like

4 of 5

2.48

2.92

2.81e-06

IPR045187

Cytochrome c/quinol oxidase subunit II

4 of 6

2.4

2.89

2.81e-06

(more ...)

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