STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_04865Uncharacterized protein. (760 aa)    
Predicted Functional Partners:
BSLG_01939
WD_REPEATS_REGION domain-containing protein.
   
 0.920
BSLG_02649
Uncharacterized protein.
  
0.914
BSLG_06504
Sas10 domain-containing protein.
   
 0.907
BSLG_02593
Uncharacterized protein.
   
 0.904
BSLG_07724
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.902
BSLG_01422
U3 small nucleolar RNA-associated protein 22.
   
  0.901
BSLG_01424
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 0.898
BSLG_05874
Uncharacterized protein.
   
 0.897
BSLG_04482
MI domain-containing protein.
   
 0.894
BSLG_09310
S4 RNA-binding domain-containing protein.
   
  0.892
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
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