STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_04610CHY-type domain-containing protein. (126 aa)    
Predicted Functional Partners:
BSLG_06774
UmuC domain-containing protein.
    
 0.684
BSLG_08824
Ubiquitin.
    
 0.681
BSLG_02419
Ubiquitin-40S ribosomal protein S27a.
    
 0.681
BSLG_01963
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.617
BSLG_05545
Uncharacterized protein.
    
 0.609
BSLG_05361
Ubiquitin-like domain-containing protein.
    
 0.609
BSLG_08605
14-3-3 family protein epsilon; Belongs to the 14-3-3 family.
 
      0.598
BSLG_06048
UV excision repair protein Rad23.
    
 0.593
BSLG_05494
NEDD8.
    
 0.591
BSLG_03870
Uncharacterized protein.
    
 0.591
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.