BSLG_04162 protein (Batrachochytrium salamandrivorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BSLG_04162

Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1457 aa)

Predicted Functional Partners:

BSLG_00555

0.967

BSLG_06859

0.873

BSLG_00311

0.839

BSLG_02247

0.825

BSLG_04599

0.809

BSLG_05516

0.799

BSLG_04074

0.799

BSLG_09013

0.795

BSLG_03978

0.795

BSLG_02059

0.795

Your Current Organism:

Batrachochytrium salamandrivorans

NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BSLG_00311	BSLG_04162	A0A1S8W999	A0A1S8VUS2	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.839
BSLG_00555	BSLG_02059	A0A1S8W8A9	A0A1S8W3W0	Uncharacterized protein.	Calmodulin; Belongs to the calmodulin family.	0.515
BSLG_00555	BSLG_02247	A0A1S8W8A9	A0A1S8W295	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.597
BSLG_00555	BSLG_03978	A0A1S8W8A9	A0A1S8VVG3	Uncharacterized protein.	Uncharacterized protein.	0.515
BSLG_00555	BSLG_04074	A0A1S8W8A9	A0A1S8VW33	Uncharacterized protein.	Actin-2; Belongs to the actin family.	0.733
BSLG_00555	BSLG_04162	A0A1S8W8A9	A0A1S8VUS2	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.967
BSLG_00555	BSLG_04599	A0A1S8W8A9	A0A1S8VTU3	Uncharacterized protein.	Sec8_exocyst domain-containing protein.	0.891
BSLG_00555	BSLG_05516	A0A1S8W8A9	A0A1S8VPX2	Uncharacterized protein.	Actin, cytoplasmic 1.	0.733
BSLG_00555	BSLG_09013	A0A1S8W8A9	A0A1S8VD65	Uncharacterized protein.	Calmodulin; Belongs to the calmodulin family.	0.515
BSLG_02059	BSLG_00555	A0A1S8W3W0	A0A1S8W8A9	Calmodulin; Belongs to the calmodulin family.	Uncharacterized protein.	0.515
BSLG_02059	BSLG_02247	A0A1S8W3W0	A0A1S8W295	Calmodulin; Belongs to the calmodulin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.911
BSLG_02059	BSLG_04074	A0A1S8W3W0	A0A1S8VW33	Calmodulin; Belongs to the calmodulin family.	Actin-2; Belongs to the actin family.	0.809
BSLG_02059	BSLG_04162	A0A1S8W3W0	A0A1S8VUS2	Calmodulin; Belongs to the calmodulin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.795
BSLG_02059	BSLG_05516	A0A1S8W3W0	A0A1S8VPX2	Calmodulin; Belongs to the calmodulin family.	Actin, cytoplasmic 1.	0.809
BSLG_02059	BSLG_06859	A0A1S8W3W0	A0A1S8VKT5	Calmodulin; Belongs to the calmodulin family.	Uncharacterized protein.	0.485
BSLG_02247	BSLG_00555	A0A1S8W295	A0A1S8W8A9	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.597
BSLG_02247	BSLG_02059	A0A1S8W295	A0A1S8W3W0	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Calmodulin; Belongs to the calmodulin family.	0.911
BSLG_02247	BSLG_03978	A0A1S8W295	A0A1S8VVG3	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.911
BSLG_02247	BSLG_04074	A0A1S8W295	A0A1S8VW33	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Actin-2; Belongs to the actin family.	0.984
BSLG_02247	BSLG_04162	A0A1S8W295	A0A1S8VUS2	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.825

page 1 of 4

Network Stats

number of nodes:

11

number of edges:

41

average node degree:

7.45

avg. local clustering coefficient:

0.934

expected number of edges:

41

PPI enrichment p-value:

0.489

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009168

Purine ribonucleoside monophosphate biosynthetic process

10 of 27

2.02

5.92

1.38e-16

GO:0006189

De novo IMP biosynthetic process

8 of 19

2.08

5.41

6.46e-14

GO:0009152

Purine ribonucleotide biosynthetic process

10 of 43

1.82

4.8

9.62e-16

GO:0006167

AMP biosynthetic process

3 of 5

2.23

2.32

3.04e-05

GO:0044208

De novo AMP biosynthetic process

2 of 2

2.45

1.6

0.0011

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016879

Ligase activity, forming carbon-nitrogen bonds

7 of 41

1.69

2.84

1.81e-08

GO:0004642

Phosphoribosylformylglycinamidine synthase activity

3 of 3

2.45

2.19

7.71e-05

GO:0016742

Hydroxymethyl-, formyl- and related transferase activity

2 of 4

2.15

1.29

0.0036

GO:0043168

Anion binding

8 of 274

0.92

0.87

7.71e-05

GO:0035639

Purine ribonucleoside triphosphate binding

7 of 231

0.93

0.85

0.00022

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005737

Cytoplasm

11 of 711

0.64

0.59

1.14e-05

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1000

IMP metabolic process

7 of 13

2.18

5.07

5.11e-12

CL:997

Ribonucleoside monophosphate biosynthetic process

9 of 31

1.92

4.84

5.51e-14

CL:996

Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolic process

10 of 41

1.84

4.79

3.32e-15

CL:1002

Phosphoribosylformylglycinamidine synthase activity, and Formyl transferase

5 of 6

2.37

4.13

5.55e-09

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

nvn00230

Purine metabolism

10 of 52

1.74

4.31

4.03e-15

nvn01110

Biosynthesis of secondary metabolites

9 of 172

1.17

1.62

8.42e-09

nvn00250

Alanine, aspartate and glutamate metabolism

3 of 27

1.5

1.13

0.0027

nvn00670

One carbon pool by folate

2 of 7

1.91

1.11

0.0068

nvn01100

Metabolic pathways

11 of 394

0.9

1.04

6.41e-09

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005737

Cytoplasm

10 of 471

0.78

0.74

1.47e-05

GOCC:0005622

Intracellular

11 of 790

0.6

0.53

3.34e-05

GOCC:0110165

Cellular anatomical entity

11 of 1017

0.49

0.41

0.00035

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0658

Purine biosynthesis

7 of 14

2.15

4.9

1.00e-11

KW-0436

Ligase

7 of 76

1.42

2.05

1.66e-07

KW-0963

Cytoplasm

7 of 94

1.33

1.79

4.50e-07

KW-0547

Nucleotide-binding

7 of 136

1.16

1.36

3.91e-06

KW-0067

ATP-binding

6 of 121

1.15

1.2

4.78e-05

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF02769

AIR synthase related protein, C-terminal domain

2 of 3

2.28

0.8

0.0346

PF00586

AIR synthase related protein, N-terminal domain

2 of 3

2.28

0.8

0.0346

Enrichment display settings

Enrichment analysis is still ongoing, please wait ...

Server load: low (26%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2024

Credits

Access

Info

About