BSLG_03011 protein (Batrachochytrium salamandrivorans)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

BSLG_03011

Rhomboid domain-containing protein. (447 aa)

Predicted Functional Partners:

BSLG_05030

0.924

BSLG_05519

0.800

BSLG_02557

0.799

BSLG_01913

0.756

BSLG_06574

0.667

BSLG_05029

0.662

BSLG_04215

0.646

BSLG_06498

0.612

BSLG_00684

0.594

BSLG_00327

0.553

Your Current Organism:

Batrachochytrium salamandrivorans

NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BSLG_00327	BSLG_00684	A0A1S8W936	A0A1S8W7R5	Uncharacterized protein; Belongs to the AAA ATPase family.	PHB domain-containing protein.	0.845
BSLG_00327	BSLG_03011	A0A1S8W936	A0A1S8VZN5	Uncharacterized protein; Belongs to the AAA ATPase family.	Rhomboid domain-containing protein.	0.553
BSLG_00327	BSLG_05029	A0A1S8W936	A0A1S8VRZ1	Uncharacterized protein; Belongs to the AAA ATPase family.	PHB domain-containing protein.	0.845
BSLG_00327	BSLG_05030	A0A1S8W936	A0A1S8VRC2	Uncharacterized protein; Belongs to the AAA ATPase family.	PHB domain-containing protein.	0.845
BSLG_00327	BSLG_05519	A0A1S8W936	A0A1S8VPN4	Uncharacterized protein; Belongs to the AAA ATPase family.	Prohibitin.	0.850
BSLG_00327	BSLG_06574	A0A1S8W936	A0A1S8VKY3	Uncharacterized protein; Belongs to the AAA ATPase family.	Prohibitin.	0.850
BSLG_00684	BSLG_00327	A0A1S8W7R5	A0A1S8W936	PHB domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.845
BSLG_00684	BSLG_01913	A0A1S8W7R5	A0A1S8W331	PHB domain-containing protein.	AAA domain-containing protein.	0.845
BSLG_00684	BSLG_02557	A0A1S8W7R5	A0A1S8W0W6	PHB domain-containing protein.	AAA domain-containing protein.	0.845
BSLG_00684	BSLG_03011	A0A1S8W7R5	A0A1S8VZN5	PHB domain-containing protein.	Rhomboid domain-containing protein.	0.594
BSLG_00684	BSLG_05519	A0A1S8W7R5	A0A1S8VPN4	PHB domain-containing protein.	Prohibitin.	0.561
BSLG_00684	BSLG_06498	A0A1S8W7R5	A0A1S8VLZ4	PHB domain-containing protein.	Uncharacterized protein.	0.845
BSLG_00684	BSLG_06574	A0A1S8W7R5	A0A1S8VKY3	PHB domain-containing protein.	Prohibitin.	0.546
BSLG_01913	BSLG_00684	A0A1S8W331	A0A1S8W7R5	AAA domain-containing protein.	PHB domain-containing protein.	0.845
BSLG_01913	BSLG_02557	A0A1S8W331	A0A1S8W0W6	AAA domain-containing protein.	AAA domain-containing protein.	0.549
BSLG_01913	BSLG_03011	A0A1S8W331	A0A1S8VZN5	AAA domain-containing protein.	Rhomboid domain-containing protein.	0.756
BSLG_01913	BSLG_04215	A0A1S8W331	A0A1S8VV37	AAA domain-containing protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.505
BSLG_01913	BSLG_05029	A0A1S8W331	A0A1S8VRZ1	AAA domain-containing protein.	PHB domain-containing protein.	0.845
BSLG_01913	BSLG_05030	A0A1S8W331	A0A1S8VRC2	AAA domain-containing protein.	PHB domain-containing protein.	0.845
BSLG_01913	BSLG_05519	A0A1S8W331	A0A1S8VPN4	AAA domain-containing protein.	Prohibitin.	0.944

page 1 of 5

Network Stats

number of nodes:

11

number of edges:

40

average node degree:

7.27

avg. local clustering coefficient:

0.844

expected number of edges:

14

PPI enrichment p-value:

1.84e-08

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006810

Transport

9 of 546

0.75

0.59

0.0018

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005886

Plasma membrane

11 of 588

0.8

0.84

2.08e-07

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:7094

Mixed, incl. ABC transporter, permease, and ABC transporter substrate-binding protein PnrA-like

11 of 18

2.32

8.88

5.90e-22

CL:7096

Mixed, incl. ABC transporter substrate-binding protein PnrA-like, and ABC transporter

8 of 8

2.53

7.45

4.79e-16

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

tom02010

ABC transporters

11 of 159

1.37

2.58

1.30e-13

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0043190

ATP-binding cassette (ABC) transporter complex

3 of 30

1.53

0.75

0.0289

GOCC:0016020

Membrane

8 of 694

0.59

0.38

0.0289

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0813

Transport

6 of 207

0.99

0.78

0.0024

KW-1003

Cell membrane

6 of 237

0.94

0.73

0.0025

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF02653

Branched-chain amino acid transport system / permease component

6 of 23

1.95

3.28

3.10e-08

PF02608

ABC transporter substrate-binding protein PnrA-like

2 of 3

2.36

0.9

0.0219

PF00005

ABC transporter

2 of 6

2.06

0.75

0.0408

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR001851

ABC transporter, permease

6 of 23

1.95

3.14

7.84e-08

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