STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_02580GRIP domain-containing protein. (1738 aa)    
Predicted Functional Partners:
BSLG_00089
Uncharacterized protein; Belongs to the DOCK family.
  
 
 0.978
URM1
Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...]
    
 0.965
BSLG_02372
Adenine phosphoribosyltransferase.
  
 
 0.873
BSLG_01196
Uncharacterized protein.
   
 0.865
BSLG_05441
ANK_REP_REGION domain-containing protein.
    
 0.850
BSLG_02992
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.850
BSLG_01644
Uncharacterized protein.
    
 0.850
BSLG_06907
ANK_REP_REGION domain-containing protein.
    
 0.843
BSLG_05872
CASP_C domain-containing protein.
    
 
 0.841
BSLG_05513
GMP synthase (Glutamine-hydrolyzing) domain-containing protein.
  
 
 0.828
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
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