STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_0230820S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (501 aa)    
Predicted Functional Partners:
BSLG_07208
RIO domain-containing protein.
   
 0.999
BSLG_06989
Uncharacterized protein.
   
 0.999
BSLG_05955
RIO domain-containing protein.
   
 0.999
BSLG_05061
Universal archaeal KH domain-containing protein.
   
 0.999
BSLG_03704
Uncharacterized protein.
   
 0.999
BSLG_01963
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.999
BSLG_01522
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 0.999
BSLG_00456
Bms1-type G domain-containing protein.
   
 0.999
BSLG_08587
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
 0.998
BSLG_08606
40S ribosomal protein S17-B.
    
  0.998
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
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