STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_02047Uncharacterized protein. (366 aa)    
Predicted Functional Partners:
BSLG_01945
Uncharacterized protein.
    
 
 0.804
BSLG_00972
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 
 0.789
BSLG_02580
GRIP domain-containing protein.
    
  0.688
BSLG_05089
Cog4 domain-containing protein.
    
 
 0.664
BSLG_03314
Cog4 domain-containing protein.
    
 
 0.664
BSLG_07013
Uncharacterized protein.
    
 
 0.660
BSLG_05289
Uncharacterized protein.
    
 
 0.660
BSLG_07548
ADF-H domain-containing protein.
    
 0.659
BSLG_07413
ADF-H domain-containing protein.
    
 0.659
BSLG_05516
Actin, cytoplasmic 1.
    
 
 0.643
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
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