STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_00595USP domain-containing protein; Belongs to the peptidase C19 family. (1121 aa)    
Predicted Functional Partners:
BSLG_00970
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.776
BSLG_05840
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.760
BSLG_01359
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.759
BSLG_02312
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.753
BSLG_04160
Uncharacterized protein.
    
 
 0.746
BSLG_01050
50S ribosomal protein L4.
    
 
 0.740
BSLG_06441
USP domain-containing protein; Belongs to the peptidase C19 family.
 
    
0.731
BSLG_01248
Ribosomal protein S16.
    
 
 0.731
BSLG_01430
Ribosomal protein L24.
    
 
 0.731
BSLG_00329
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.731
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.