STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_00052AAA domain-containing protein; Belongs to the AAA ATPase family. (453 aa)    
Predicted Functional Partners:
BSLG_00464
HORMA domain-containing protein.
   
 
 0.978
BSLG_04685
Cytochrome c domain-containing protein.
 
    
 0.903
BSLG_03186
MPN domain-containing protein.
    
 0.811
BSLG_05035
Uncharacterized protein.
    
 0.807
BSLG_00969
Uncharacterized protein.
   
 0.801
BSLG_03190
UBX domain-containing protein.
    
 0.796
BSLG_03271
WD_REPEATS_REGION domain-containing protein.
   
 
 0.795
BSLG_02804
WD_REPEATS_REGION domain-containing protein.
   
 
 0.795
BSLG_01621
Uncharacterized protein.
  
  
 0.793
BSLG_02291
Uncharacterized protein.
   
 0.787
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
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