STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIL51460.1Type 11 methyltransferase; Pfam: Methyltransferase domain. (198 aa)    
Predicted Functional Partners:
KIL51459.1
L-2-haloalkanoic acid dehalogenase; TIGRFAM: HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1; Pfam: Haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3; TIGRFAM: HAD-SF-IIIA: HAD hydrolase, family IIIA; PRINTS: Haloacid dehalogenase/epoxide hydrolase family signature.
       0.675
KIL51458.1
Hypothetical protein; SMART: Tetratricopeptide repeats; Pfam: Tetratrico peptide repeat.
       0.640
KIL50706.1
Hypothetical protein; Pfam: Cytochrome P450.
    
 0.635
KIL51461.1
Hypothetical protein.
       0.532
KIL50744.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.503
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
 
 0.445
Your Current Organism:
Jeotgalibacillus alimentarius
NCBI taxonomy Id: 135826
Other names: Bacillus kangii, J. alimentarius, JCM 10872, Jeotgalibacillus alimentarius Yoon et al. 2001, KCCM 80002, strain YKJ-13
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