STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIL48893.1DNA-dirted DNA polymerase; Overlaps another CDS; Pfam: RNase_H superfamily. (408 aa)    
Predicted Functional Partners:
KIL48894.1
ATP-dependent helicase; Overlaps another CDS; Pfam: Domain of unknown function (DUF1998); Pfam: DEAD/DEAH box helicase; SMART: DEAD-like helicases superfamily; SMART: helicase superfamily c-terminal domain; Pfam: Helicase conserved C-terminal domain.
 
  
 0.964
KIL48895.1
Hypothetical protein; Pfam: Bacterial domain of unknown function (DUF1798).
 
     0.821
KIL50127.1
Transcriptional regulator; SMART: helix_turn_helix multiple antibiotic resistance protein; Pfam: MarR family.
  
     0.528
KIL46891.1
Membrane protein.
  
     0.505
KIL48892.1
Hypothetical protein.
       0.470
KIL44013.1
Pfam: Protein of unknown function (DUF2529).
  
     0.450
Your Current Organism:
Jeotgalibacillus alimentarius
NCBI taxonomy Id: 135826
Other names: Bacillus kangii, J. alimentarius, JCM 10872, Jeotgalibacillus alimentarius Yoon et al. 2001, KCCM 80002, strain YKJ-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.