STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIL43435.1Hypothetical protein; Pfam: CsbD-like; Belongs to the UPF0337 (CsbD) family. (60 aa)    
Predicted Functional Partners:
KIL52596.1
General stress protein; Pfam: Pyridoxamine 5'-phosphate oxidase.
 
    0.930
KIL46899.1
Pfam: Uncharacterized protein conserved in bacteria (DUF2188).
  
    0.900
KIL50199.1
Pfam: Acetyltransferase (GNAT) domain.
  
    0.748
KIL43436.1
Hypothetical protein; Pfam: EAL domain; SMART: diguanylate cyclase; Pfam: CHASE4 domain; SMART: Putative diguanylate phosphodiesterase; Pfam: GGDEF domain; TIGRFAM: GGDEF: diguanylate cyclase (GGDEF) domain.
       0.723
KIL50237.1
Hypothetical protein; TIGRFAM: perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily; Pfam: OsmC-like protein.
  
  
 0.717
KIL51482.1
Hypothetical protein; Pfam: Domain of unknown function (DUF4440).
  
     0.703
KIL50714.1
Hypothetical protein; Pfam: YqcI/YcgG family.
  
     0.692
KIL50109.1
Hypothetical protein; Pfam: NADH(P)-binding.
  
    0.687
KIL47268.1
Pfam: YtxH-like protein.
 
    0.660
KIL51238.1
Pfam: Protein of unknown function (DUF3243).
  
     0.656
Your Current Organism:
Jeotgalibacillus alimentarius
NCBI taxonomy Id: 135826
Other names: Bacillus kangii, J. alimentarius, JCM 10872, Jeotgalibacillus alimentarius Yoon et al. 2001, KCCM 80002, strain YKJ-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.