STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIL43497.1Pfam: Glycosyl transferases group 1; Pfam: Glycosyltransferase Family 4. (375 aa)    
Predicted Functional Partners:
KIL43498.1
Pfam: NAD dependent epimerase/dehydratase family.
 
 
  0.917
KIL43496.1
Pfam: GtrA-like protein.
 
   
 0.877
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.666
KIL44655.1
UDP-glucose 6-dehydrogenase; SMART: UDP binding domain; TIGRFAM: NDP-sugDHase: nucleotide sugar dehydrogenase; Pfam: UDP-glucose/GDP-mannose dehydrogenase family, central domain; Pfam: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; Pfam: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain.
 
  
 0.604
KIL43548.1
Spore coat protein; Pfam: Nucleotidyl transferase.
  
 
 0.580
KIL46628.1
Glycosyltransferase; Pfam: Glycosyl transferase family 2.
 
 0.576
KIL43553.1
Spore coat protein; Overlaps another CDS; Pfam: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.576
KIL50682.1
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.561
KIL43554.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.527
KIL43546.1
Hypothetical protein; Pfam: O-antigen ligase like membrane protein.
    
 0.522
Your Current Organism:
Jeotgalibacillus alimentarius
NCBI taxonomy Id: 135826
Other names: Bacillus kangii, J. alimentarius, JCM 10872, Jeotgalibacillus alimentarius Yoon et al. 2001, KCCM 80002, strain YKJ-13
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