STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIL43499.1Hypothetical protein; Overlaps another CDS; Pfam: Acetyltransferase (GNAT) domain. (184 aa)    
Predicted Functional Partners:
KIL43500.1
Hypothetical protein; Overlaps another CDS.
       0.781
KIL51613.1
Pfam: Acetyltransferase (GNAT) domain.
  
     0.738
KIL43501.1
Hypothetical protein; Pfam: Acetyltransferase (GNAT) domain.
       0.603
KIL43569.1
Hypothetical protein; Pfam: Glutamate synthase central domain; Pfam: Conserved region in glutamate synthase; Pfam: Glutamine amidotransferases class-II; Pfam: GXGXG motif.
   
 
 0.572
KIL43498.1
Pfam: NAD dependent epimerase/dehydratase family.
       0.498
KIL48329.1
3-deoxy-7-phosphoheptulonate synthase; Pfam: Chorismate mutase type II; TIGRFAM: CM_A: chorismate mutase; SMART: Chorismate mutase type II; TIGRFAM: DAHP_synth_Bsub: phospho-2-dehydro-3-deoxyheptonate aldolase; Pfam: DAHP synthetase I family.
    
  0.482
KIL43497.1
Pfam: Glycosyl transferases group 1; Pfam: Glycosyltransferase Family 4.
       0.480
KIL50546.1
TIGRFAM: OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
  0.464
KIL43496.1
Pfam: GtrA-like protein.
       0.450
KIL43502.1
3-ketoacyl-ACP reductase; PRINTS: Glucose/ribitol dehydrogenase family signature; Pfam: Enoyl-(Acyl carrier protein) reductase.
       0.435
Your Current Organism:
Jeotgalibacillus alimentarius
NCBI taxonomy Id: 135826
Other names: Bacillus kangii, J. alimentarius, JCM 10872, Jeotgalibacillus alimentarius Yoon et al. 2001, KCCM 80002, strain YKJ-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.