STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIL43568.1Glutamate synthase, NADH/NADPH, small subunit; Pfam: Pyridine nucleotide-disulphide oxidoreductase; PRINTS: Adrenodoxin reductase family signature; Pfam: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; TIGRFAM: GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit. (495 aa)    
Predicted Functional Partners:
KIL43569.1
Hypothetical protein; Pfam: Glutamate synthase central domain; Pfam: Conserved region in glutamate synthase; Pfam: Glutamine amidotransferases class-II; Pfam: GXGXG motif.
 0.999
pyrK
Dihydroorotate dehydrogenase; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
 
 0.994
KIL50568.1
Pfam: Glutamine synthetase, beta-Grasp domain; TIGRFAM: GlnA: glutamine synthetase, type I; Pfam: Glutamine synthetase, catalytic domain.
  
 
 0.925
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.908
KIL53248.1
Citrate synthase; TIGRFAM: cit_synth_II: 2-methylcitrate synthase/citrate synthase II; PRINTS: Citrate synthase signature; Pfam: Citrate synthase; Belongs to the citrate synthase family.
     
 0.905
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 
 0.903
KIL50262.1
Hydrolase; Pfam: Carbon-nitrogen hydrolase.
  
 0.903
KIL50795.1
Pfam: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
    
 0.899
KIL48902.1
Pfam: Aminotransferase class I and II; PRINTS: 1-aminocyclopropane-1-carboxylate synthase signature.
  
 
 0.899
rocA
Pfam: Aldehyde dehydrogenase family; TIGRFAM: D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. RocA subfamily.
    
 0.899
Your Current Organism:
Jeotgalibacillus alimentarius
NCBI taxonomy Id: 135826
Other names: Bacillus kangii, J. alimentarius, JCM 10872, Jeotgalibacillus alimentarius Yoon et al. 2001, KCCM 80002, strain YKJ-13
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