STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV68644.1biotin--[acetyl-CoA-carboxylase] ligase. (241 aa)    
Predicted Functional Partners:
pccA
propionyl-CoA carboxylase, alpha subunit.
 
  
 0.974
pccB
propionyl-CoA carboxylase, beta subunit.
  
 
 0.944
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.671
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.619
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.583
tme
NADP-dependent malic enzyme.
     
 0.572
coaX
Pantothenate kinase, type III family protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
 
    0.540
fabD
Malonyl CoA-acyl carrier protein transacylase.
     
 0.532
codA
Cytidine and deoxycytidylate deaminase.
  
    0.531
pheT
phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.524
Your Current Organism:
Neoehrlichia lotoris
NCBI taxonomy Id: 1359163
Other names: C. Neoehrlichia lotoris str. RAC413, Candidatus Neoehrlichia lotoris str. RAC413
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