STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV68978.1trbL/VirB6 plasmid conjugal transfer family protein. (5117 aa)    
Predicted Functional Partners:
KJV69358.1
virB8 family protein.
 
  
 0.971
KJV68982.1
Type IV secretion/conjugal transfer ATPase, VirB4 family protein.
 
 
 0.944
KJV68983.1
Type IV secretory pathway, VirB3-like family protein.
  
  
 0.926
KJV69360.1
Bacterial conjugation TrbI-like family protein.
 
 
 0.925
KJV69359.1
P-type conjugative transfer protein VirB9.
 
 0.921
KJV68979.1
trbL/VirB6 plasmid conjugal transfer family protein.
 
  
0.912
KJV68980.1
trbL/VirB6 plasmid conjugal transfer family protein.
   
0.888
KJV69210.1
P-type conjugative transfer protein VirB9.
 
 0.879
KJV68692.1
Helix-turn-helix family protein.
  
   
 0.853
KJV69493.1
cagE, TrbE, VirB, component of type IV transporter system family protein.
  
 
 0.809
Your Current Organism:
Neoehrlichia lotoris
NCBI taxonomy Id: 1359163
Other names: C. Neoehrlichia lotoris str. RAC413, Candidatus Neoehrlichia lotoris str. RAC413
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