node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ffh | ftsY | NLO413_0376 | NLO413_0822 | Signal recognition particle protein. | Signal recognition particle-docking protein FtsY. | 0.999 |
ffh | rplC | NLO413_0376 | NLO413_0438 | Signal recognition particle protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.989 |
ffh | rplO | NLO413_0376 | NLO413_0420 | Signal recognition particle protein. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.986 |
ffh | rplW | NLO413_0376 | NLO413_0436 | Signal recognition particle protein. | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.993 |
ffh | secA | NLO413_0376 | NLO413_0803 | Signal recognition particle protein. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.959 |
ffh | secB | NLO413_0376 | NLO413_0576 | Signal recognition particle protein. | Protein-export chaperone SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.955 |
ffh | secE | NLO413_0376 | NLO413_0958 | Signal recognition particle protein. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.976 |
ffh | secY | NLO413_0376 | NLO413_0419 | Signal recognition particle protein. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.983 |
ffh | yajC | NLO413_0376 | NLO413_0910 | Signal recognition particle protein. | Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. | 0.955 |
ffh | yidC | NLO413_0376 | NLO413_0065 | Signal recognition particle protein. | Membrane protein insertase, YidC/Oxa1 family domain protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.970 |
ftsY | ffh | NLO413_0822 | NLO413_0376 | Signal recognition particle-docking protein FtsY. | Signal recognition particle protein. | 0.999 |
ftsY | rplC | NLO413_0822 | NLO413_0438 | Signal recognition particle-docking protein FtsY. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.932 |
ftsY | rplO | NLO413_0822 | NLO413_0420 | Signal recognition particle-docking protein FtsY. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.931 |
ftsY | rplW | NLO413_0822 | NLO413_0436 | Signal recognition particle-docking protein FtsY. | Ribosomal L23 family protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.930 |
ftsY | secA | NLO413_0822 | NLO413_0803 | Signal recognition particle-docking protein FtsY. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.965 |
ftsY | secB | NLO413_0822 | NLO413_0576 | Signal recognition particle-docking protein FtsY. | Protein-export chaperone SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.959 |
ftsY | secE | NLO413_0822 | NLO413_0958 | Signal recognition particle-docking protein FtsY. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.974 |
ftsY | secY | NLO413_0822 | NLO413_0419 | Signal recognition particle-docking protein FtsY. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.984 |
ftsY | yajC | NLO413_0822 | NLO413_0910 | Signal recognition particle-docking protein FtsY. | Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. | 0.965 |
ftsY | yidC | NLO413_0822 | NLO413_0065 | Signal recognition particle-docking protein FtsY. | Membrane protein insertase, YidC/Oxa1 family domain protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.965 |