Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L798_01332 | L798_02841 | A0A067QLD4 | A0A067RDV6 | THO complex subunit 4-B. | RNA-binding protein 1. | 0.882 |
L798_01332 | L798_03354 | A0A067QLD4 | A0A067QGF0 | THO complex subunit 4-B. | Enhancer of rudimentary homolog; May have a role in the cell cycle. | 0.679 |
L798_01332 | L798_05970 | A0A067QLD4 | A0A067RHZ4 | THO complex subunit 4-B. | Uncharacterized protein. | 0.821 |
L798_01332 | L798_07339 | A0A067QLD4 | A0A067R8K5 | THO complex subunit 4-B. | FoP_duplication domain-containing protein. | 0.852 |
L798_01332 | L798_07698 | A0A067QLD4 | A0A067REK6 | THO complex subunit 4-B. | Small nuclear ribonucleoprotein Sm D3. | 0.836 |
L798_01332 | L798_09491 | A0A067QLD4 | A0A067R1E0 | THO complex subunit 4-B. | Small nuclear ribonucleoprotein G. | 0.799 |
L798_01332 | L798_10765 | A0A067QLD4 | A0A067QWE7 | THO complex subunit 4-B. | Small nuclear ribonucleoprotein Sm D2. | 0.541 |
L798_01332 | L798_11761 | A0A067QLD4 | A0A067R7G1 | THO complex subunit 4-B. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.607 |
L798_01332 | L798_14145 | A0A067QLD4 | A0A067R2E7 | THO complex subunit 4-B. | Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.828 |
L798_01845 | L798_02841 | A0A067RR68 | A0A067RDV6 | La protein-like protein. | RNA-binding protein 1. | 0.650 |
L798_01845 | L798_03354 | A0A067RR68 | A0A067QGF0 | La protein-like protein. | Enhancer of rudimentary homolog; May have a role in the cell cycle. | 0.523 |
L798_01845 | L798_05970 | A0A067RR68 | A0A067RHZ4 | La protein-like protein. | Uncharacterized protein. | 0.536 |
L798_01845 | L798_07698 | A0A067RR68 | A0A067REK6 | La protein-like protein. | Small nuclear ribonucleoprotein Sm D3. | 0.634 |
L798_01845 | L798_09491 | A0A067RR68 | A0A067R1E0 | La protein-like protein. | Small nuclear ribonucleoprotein G. | 0.532 |
L798_01845 | L798_10765 | A0A067RR68 | A0A067QWE7 | La protein-like protein. | Small nuclear ribonucleoprotein Sm D2. | 0.643 |
L798_01845 | L798_14145 | A0A067RR68 | A0A067R2E7 | La protein-like protein. | Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.540 |
L798_02841 | L798_01332 | A0A067RDV6 | A0A067QLD4 | RNA-binding protein 1. | THO complex subunit 4-B. | 0.882 |
L798_02841 | L798_01845 | A0A067RDV6 | A0A067RR68 | RNA-binding protein 1. | La protein-like protein. | 0.650 |
L798_02841 | L798_03354 | A0A067RDV6 | A0A067QGF0 | RNA-binding protein 1. | Enhancer of rudimentary homolog; May have a role in the cell cycle. | 0.535 |
L798_02841 | L798_05970 | A0A067RDV6 | A0A067RHZ4 | RNA-binding protein 1. | Uncharacterized protein. | 0.713 |
page 1 of 5