STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L798_01766Putative elongator complex protein 2. (851 aa)    
Predicted Functional Partners:
L798_10020
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
   
 0.995
L798_10291
Dermal papilla-derived protein 6-like protein.
   
 0.969
L798_00725
Elongator complex protein 4.
   
 0.930
L798_00065
Putative elongator complex protein 3.
   
 
 0.929
L798_04365
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.929
L798_00726
Tetraspanin.
   
 
 0.896
L798_06827
KTI12-like protein.
    
 
 0.832
L798_02005
WD repeat-containing protein 36.
   
    0.830
L798_06670
WD repeat-containing protein 3.
   
    0.695
L798_05809
Myosin-Ie; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.685
Your Current Organism:
Zootermopsis nevadensis
NCBI taxonomy Id: 136037
Other names: Z. nevadensis
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