STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L798_07651WD repeat-containing protein 55-like protein. (393 aa)    
Predicted Functional Partners:
L798_05573
Ribosome biogenesis protein WDR12-like protein.
  
 
 0.829
L798_07140
Cyclin G-associated kinase.
   
  
 0.710
L798_02447
Protein Red.
 
      0.678
L798_01406
Tetratricopeptide repeat protein 27.
   
    0.647
L798_05993
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
   0.578
L798_15604
RNA helicase.
   
  0.546
L798_06108
WD repeat-containing protein 74.
   
    0.544
L798_09306
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
    0.543
L798_03528
WD repeat-containing protein 18.
   
    0.542
L798_00404
tRNA (Adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6.
   
    0.538
Your Current Organism:
Zootermopsis nevadensis
NCBI taxonomy Id: 136037
Other names: Z. nevadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.