STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L798_11387Histone deacetylase complex subunit SAP30-like protein. (171 aa)    
Predicted Functional Partners:
L798_07723
Sin3 histone deacetylase corepressor complex component SDS3.
   
 0.925
L798_04070
Paired amphipathic helix protein Sin3a.
    
 0.917
L798_14759
Histone deacetylase complex subunit SAP18.
     
 0.894
L798_02180
Breast cancer metastasis-suppressor 1-like protein.
   
 0.874
L798_01944
Putative histone-binding protein Caf1.
    
 0.865
L798_08497
Histone deacetylase Rpd3.
    
 0.810
L798_15060
Histone deacetylase complex subunit SAP130.
    
 0.786
L798_03938
AT-rich interactive domain-containing protein 4B.
    
 0.778
L798_04605
Uncharacterized protein.
    
 
 0.736
L798_04324
Histone deacetylase 6.
    
 0.732
Your Current Organism:
Zootermopsis nevadensis
NCBI taxonomy Id: 136037
Other names: Z. nevadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.